{"id":4492,"date":"2023-07-10T16:35:21","date_gmt":"2023-07-10T16:35:21","guid":{"rendered":"https:\/\/statorials.org\/ar\/%d8%ae%d8%b1%d9%8a%d8%b7%d8%a9-phatmap-r\/"},"modified":"2023-07-10T16:35:21","modified_gmt":"2023-07-10T16:35:21","slug":"%d8%ae%d8%b1%d9%8a%d8%b7%d8%a9-phatmap-r","status":"publish","type":"post","link":"https:\/\/statorials.org\/ar\/%d8%ae%d8%b1%d9%8a%d8%b7%d8%a9-phatmap-r\/","title":{"rendered":"\u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 pheatmap() \u0641\u064a r \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u0627\u0644\u062d\u0631\u0627\u0631\u0629"},"content":{"rendered":"

<\/p>\n

\n

\u064a\u0645\u0643\u0646\u0643 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0648\u0638\u064a\u0641\u0629 pheatmap()<\/strong> \u0644\u062d\u0632\u0645\u0629 pheatmap<\/strong> \u0641\u064a R \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u062d\u0631\u0627\u0631\u064a\u0629 \u0645\u062e\u0635\u0635\u0629 \u0644\u0644\u063a\u0627\u064a\u0629.<\/span><\/p>\n

\u062a\u0648\u0636\u062d \u0627\u0644\u0623\u0645\u062b\u0644\u0629 \u0627\u0644\u062a\u0627\u0644\u064a\u0629 \u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0647\u0630\u0647 \u0627\u0644\u0648\u0638\u064a\u0641\u0629 \u0639\u0645\u0644\u064a\u064b\u0627 \u0645\u0639 \u0645\u062c\u0645\u0648\u0639\u0629 \u0627\u0644\u0628\u064a\u0627\u0646\u0627\u062a \u0627\u0644\u0645\u0632\u064a\u0641\u0629 \u0627\u0644\u062a\u0627\u0644\u064a\u0629:<\/span><\/p>\n

 #make this example reproducible\n<\/span>set. seeds<\/span> (1)\n\n#create matrix with fake data values\n<\/span>data = matrix(rnorm(100), 20, 5)\ndata[1:10, seq(1, 5, 1)] = data[1:10, seq(1, 5, 1)] + 3\ndata [11:20, seq(2, 5, 1)] = data [11:20, seq(2, 5, 1)] + 2\ndata [15:20, seq(2, 5, 1)] = data [15:20, seq(2, 5, 1)] + 4\n\n#add column names and row names\n<\/span>colnames(data) = paste(\" T<\/span> \", 1:5, sep = \"\")\nrownames(data) = paste(\" Gene<\/span> \", 1:20, sep=\"\")\n\n#view matrx\n<\/span>data\n\n                T1 T2 T3 T4 T5\nGene1 2.37354619 3.918977 2.8354764 5.401618 2.431331\nGene2 3.18364332 3.782136 2.7466383 2.960760 2.864821\nGene3 2.16437139 3.074565 3.6969634 3.689739 4.178087\nGene4 4.59528080 1.010648 3.5566632 3.028002 1.476433\nGene5 3.32950777 3.619826 2.3112443 2.256727 3.593946\nGene6 2.17953162 2.943871 2.2925048 3.188792 3.332950\nGene7 3.48742905 2.844204 3.3645820 1.195041 4.063100\nGene8 3.73832471 1.529248 3.7685329 4.465555 2.695816\nGene9 3.57578135 2.521850 2.8876538 3.153253 3.370019\nGene10 2.69461161 3.417942 3.8811077 5.172612 3.267099\nGene11 1.51178117 3.358680 2.3981059 2.475510 1.457480\nGene12 0.38984324 1.897212 1.3879736 1.290054 3.207868\nGene13 -0.62124058 2.387672 2.3411197 2.610726 3.160403\nGene14 -2.21469989 1.946195 0.8706369 1.065902 2.700214\nGene15 1.12493092 4.622940 7.4330237 4.746367 7.586833\nGene16 -0.04493361 5.585005 7.9803999 6.291446 6.558486\nGene17 -0.01619026 5.605710 5.6327785 5.556708 4.723408\nGene18 0.94383621 5.940687 4.9558654 6.001105 5.426735\nGene19 0.82122120 7.100025 6.5697196 6.074341 4.775387\nGene20 0.59390132 6.763176 5.8649454 5.410479 5.526599<\/strong><\/pre>\n
 \u0645\u062b\u0627\u0644 1: \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u064a\u0629 \u0623\u0633\u0627\u0633\u064a\u0629<\/strong><\/span><\/h2>\n
 \u064a\u0645\u0643\u0646\u0646\u0627 \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u064a\u0629 \u0628\u0627\u0644\u0625\u0639\u062f\u0627\u062f\u0627\u062a \u0627\u0644\u0627\u0641\u062a\u0631\u0627\u0636\u064a\u0629 \u0641\u064a \u0627\u0644\u062e\u0631\u064a\u0637\u0629 \u0627\u0644\u062d\u0631\u0627\u0631\u064a\u0629<\/strong> \u0644\u062a\u0635\u0648\u0631 \u062c\u0645\u064a\u0639 \u0642\u064a\u0645 \u0627\u0644\u0645\u0635\u0641\u0648\u0641\u0629:<\/span> <\/p>\n
 library<\/span> (heatmap)\n\n#create basic heatmap<\/span>\npheatmap(data)<\/span><\/span><\/strong> <\/pre>\n
\"\u0645\u062b\u0627\u0644<\/p>\n
 \u0627\u0644\u0645\u062b\u0627\u0644 2: \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u064a\u0629 \u0628\u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u062a\u0633\u0645\u064a\u0627\u062a \u0627\u0644\u062e\u0644\u0627\u064a\u0627<\/strong><\/span><\/h2>\n
 \u064a\u0645\u0643\u0646\u0646\u0627 \u0627\u0644\u0625\u0646\u0634\u0627\u0621 \u0628\u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0627\u0644\u0648\u0633\u064a\u0637\u062a\u064a\u0646 Display_numbers<\/strong> \u0648 fontsize_number<\/strong> \u0644\u0639\u0631\u0636 \u0627\u0644\u0642\u064a\u0645 \u0627\u0644\u0631\u0642\u0645\u064a\u0629 \u0641\u064a \u0643\u0644 \u062e\u0644\u064a\u0629 \u0645\u0646 \u0627\u0644\u062e\u0631\u064a\u0637\u0629 \u0627\u0644\u062d\u0631\u0627\u0631\u064a\u0629 \u0628\u062d\u062c\u0645 \u062e\u0637 \u0645\u062d\u062f\u062f:<\/span> <\/p>\n
 library<\/span> (heatmap)\n\n#create heatmap with numerical labels in cells<\/span>\npheatmap(data, display_numbers= TRUE<\/span> , fontsize_number= 12<\/span> )\n<\/span><\/span><\/strong><\/pre>\n
\"\"<\/p>\n
 \u0645\u0644\u0627\u062d\u0638\u0629<\/strong> : \u0627\u0644\u0642\u064a\u0645\u0629 \u0627\u0644\u0627\u0641\u062a\u0631\u0627\u0636\u064a\u0629 \u0644\u0640 Fontsize_number<\/strong> \u0647\u064a 8<\/strong> .<\/span><\/p>\n
 \u0627\u0644\u0645\u062b\u0627\u0644 3: \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u064a\u0629 \u0628\u0623\u0644\u0648\u0627\u0646 \u0645\u062e\u0635\u0635\u0629<\/strong><\/span><\/h2>\n
 \u064a\u0645\u0643\u0646\u0646\u0627 \u0623\u064a\u0636\u064b\u0627 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0627\u0644\u0648\u0633\u064a\u0637\u0629 colorRampPalette<\/strong> \u0644\u062a\u062d\u062f\u064a\u062f \u0627\u0644\u0623\u0644\u0648\u0627\u0646 \u0627\u0644\u062a\u064a \u0633\u064a\u062a\u0645 \u0627\u0633\u062a\u062e\u062f\u0627\u0645\u0647\u0627 \u0644\u0644\u0642\u064a\u0645 \u0627\u0644\u0645\u0646\u062e\u0641\u0636\u0629 \u0648\u0627\u0644\u0645\u062a\u0648\u0633\u0637\u0629 \u0648\u0627\u0644\u0639\u0627\u0644\u064a\u0629 \u0641\u064a \u0627\u0644\u062e\u0631\u064a\u0637\u0629 \u0627\u0644\u062d\u0631\u0627\u0631\u064a\u0629:<\/span> <\/p>\n
 library<\/span> (heatmap)\n\n#create heatmap with custom colors<\/span>\npheatmap(data, color=colorRampPalette(c(\" blue<\/span> \", \" white<\/span> \", \" red<\/span> \"))(20))<\/span><\/span><\/strong> <\/pre>\n
\"\"<\/p>\n
 \u064a\u062a\u0645 \u0627\u0644\u0622\u0646 \u0639\u0631\u0636 \u0627\u0644\u0642\u064a\u0645 \u0627\u0644\u0645\u0646\u062e\u0641\u0636\u0629 \u0628\u0627\u0644\u0644\u0648\u0646 \u0627\u0644\u0623\u0632\u0631\u0642<\/strong> \u060c \u0648\u064a\u062a\u0645 \u0639\u0631\u0636 \u0627\u0644\u0642\u064a\u0645 \u0627\u0644\u0645\u062a\u0648\u0633\u0637\u0629 \u0628\u0627\u0644\u0644\u0648\u0646 \u0627\u0644\u0623\u0628\u064a\u0636<\/strong> \u060c \u0648\u064a\u062a\u0645 \u0639\u0631\u0636 \u0627\u0644\u0642\u064a\u0645 \u0627\u0644\u0639\u0627\u0644\u064a\u0629 \u0628\u0627\u0644\u0644\u0648\u0646 \u0627\u0644\u0623\u062d\u0645\u0631<\/strong> .<\/span><\/p>\n
 \u0644\u0627 \u062a\u062a\u0631\u062f\u062f \u0641\u064a \u062a\u062d\u062f\u064a\u062f \u0627\u0644\u0623\u0644\u0648\u0627\u0646 \u0627\u0644\u062a\u064a \u062a\u0631\u064a\u062f\u0647\u0627 \u0644\u0625\u0646\u0634\u0627\u0621 \u0645\u0642\u064a\u0627\u0633 \u0627\u0644\u0623\u0644\u0648\u0627\u0646 \u0627\u0644\u062e\u0627\u0635 \u0628\u0643 \u0644\u0644\u062e\u0631\u064a\u0637\u0629 \u0627\u0644\u062d\u0631\u0627\u0631\u064a\u0629 \u0627\u0644\u062e\u0627\u0635\u0629 \u0628\u0643.<\/span><\/p>\n
 \u0645\u0635\u0627\u062f\u0631 \u0625\u0636\u0627\u0641\u064a\u0629<\/strong><\/span><\/h2>\n
 \u062a\u0634\u0631\u062d \u0627\u0644\u0628\u0631\u0627\u0645\u062c \u0627\u0644\u062a\u0639\u0644\u064a\u0645\u064a\u0629 \u0627\u0644\u062a\u0627\u0644\u064a\u0629 \u0643\u064a\u0641\u064a\u0629 \u062a\u0646\u0641\u064a\u0630 \u0627\u0644\u0645\u0647\u0627\u0645 \u0627\u0644\u0634\u0627\u0626\u0639\u0629 \u0627\u0644\u0623\u062e\u0631\u0649 \u0641\u064a R:<\/span><\/p>\n
 \u0643\u064a\u0641\u064a\u0629 \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u0629 \u0627\u0644\u0627\u0631\u062a\u0628\u0627\u0637 \u0641\u064a R<\/a>
 \u0643\u064a\u0641\u064a\u0629 \u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u064a\u0637\u0629 \u062d\u0631\u0627\u0631\u064a\u0629 \u0641\u064a R \u0628\u0627\u0633\u062a\u062e\u062f\u0627\u0645 ggplot2<\/a>
 \u0643\u064a\u0641\u064a\u0629 \u0631\u0633\u0645 \u0627\u0644\u0628\u064a\u0627\u0646\u0627\u062a \u0627\u0644\u0641\u0626\u0648\u064a\u0629 \u0641\u064a R<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"
\u064a\u0645\u0643\u0646\u0643 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0648\u0638\u064a\u0641\u0629 pheatmap() \u0644\u062d\u0632\u0645\u0629 pheatmap \u0641\u064a R \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u062d\u0631\u0627\u0631\u064a\u0629 \u0645\u062e\u0635\u0635\u0629 \u0644\u0644\u063a\u0627\u064a\u0629. \u062a\u0648\u0636\u062d \u0627\u0644\u0623\u0645\u062b\u0644\u0629 \u0627\u0644\u062a\u0627\u0644\u064a\u0629 \u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0647\u0630\u0647 \u0627\u0644\u0648\u0638\u064a\u0641\u0629 \u0639\u0645\u0644\u064a\u064b\u0627 \u0645\u0639 \u0645\u062c\u0645\u0648\u0639\u0629 \u0627\u0644\u0628\u064a\u0627\u0646\u0627\u062a \u0627\u0644\u0645\u0632\u064a\u0641\u0629 \u0627\u0644\u062a\u0627\u0644\u064a\u0629: #make this example reproducible set. seeds (1) #create matrix with fake data values data = matrix(rnorm(100), 20, 5) data[1:10, seq(1, 5, 1)] = data[1:10, seq(1, 5, 1)] + 3 […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[11],"tags":[],"yoast_head":"\n\u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 pheatmap() \u0641\u064a R \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u062d\u0631\u0627\u0631\u064a\u0629 - Statorials<\/title>\n<meta name=\"description\" content=\"\u064a\u0634\u0631\u062d \u0647\u0630\u0627 \u0627\u0644\u0628\u0631\u0646\u0627\u0645\u062c \u0627\u0644\u062a\u0639\u0644\u064a\u0645\u064a \u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0648\u0638\u064a\u0641\u0629 Heatmap() \u0641\u064a R \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u062d\u0631\u0627\u0631\u064a\u0629\u060c \u0645\u0639 \u0639\u062f\u0629 \u0623\u0645\u062b\u0644\u0629\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/statorials.org\/ar\/\u062e\u0631\u064a\u0637\u0629-phatmap-r\/\" \/>\n<meta property=\"og:locale\" content=\"az_AZ\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"\u0643\u064a\u0641\u064a\u0629 \u0627\u0633\u062a\u062e\u062f\u0627\u0645 pheatmap() \u0641\u064a R \u0644\u0625\u0646\u0634\u0627\u0621 \u062e\u0631\u0627\u0626\u0637 \u062d\u0631\u0627\u0631\u064a\u0629 - 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