{"id":2553,"date":"2023-07-21T18:14:57","date_gmt":"2023-07-21T18:14:57","guid":{"rendered":"https:\/\/statorials.org\/uk\/%d0%ba%d0%b2%d0%b0%d0%bd%d1%82%d0%b8%d0%bb%d1%8c%d0%bd%d0%b0-%d0%bd%d0%be%d1%80%d0%bc%d0%b0%d0%bb%d1%96%d0%b7%d0%b0%d1%86%d1%96%d1%8f-%d0%b2-r\/"},"modified":"2023-07-21T18:14:57","modified_gmt":"2023-07-21T18:14:57","slug":"%d0%ba%d0%b2%d0%b0%d0%bd%d1%82%d0%b8%d0%bb%d1%8c%d0%bd%d0%b0-%d0%bd%d0%be%d1%80%d0%bc%d0%b0%d0%bb%d1%96%d0%b7%d0%b0%d1%86%d1%96%d1%8f-%d0%b2-r","status":"publish","type":"post","link":"https:\/\/statorials.org\/uk\/%d0%ba%d0%b2%d0%b0%d0%bd%d1%82%d0%b8%d0%bb%d1%8c%d0%bd%d0%b0-%d0%bd%d0%be%d1%80%d0%bc%d0%b0%d0%bb%d1%96%d0%b7%d0%b0%d1%86%d1%96%d1%8f-%d0%b2-r\/","title":{"rendered":"\u042f\u043a \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e \u0432 r"},"content":{"rendered":"<p><\/p>\n<hr>\n<p><span style=\"color: #000000;\">\u0423 \u0441\u0442\u0430\u0442\u0438\u0441\u0442\u0438\u0446\u0456 <a href=\"https:\/\/en.wikipedia.org\/wiki\/Quantile_normalization\" target=\"_blank\" rel=\"noopener\">\u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0430 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044f<\/a> \u2014 \u0446\u0435 \u043c\u0435\u0442\u043e\u0434, \u044f\u043a\u0438\u0439 \u0440\u043e\u0431\u0438\u0442\u044c \u0434\u0432\u0430 \u0440\u043e\u0437\u043f\u043e\u0434\u0456\u043b\u0438 \u0456\u0434\u0435\u043d\u0442\u0438\u0447\u043d\u0438\u043c\u0438 \u0437 \u0442\u043e\u0447\u043a\u0438 \u0437\u043e\u0440\u0443 \u0441\u0442\u0430\u0442\u0438\u0441\u0442\u0438\u0447\u043d\u0438\u0445 \u0432\u043b\u0430\u0441\u0442\u0438\u0432\u043e\u0441\u0442\u0435\u0439.<\/span><\/p>\n<p> <span style=\"color: #000000;\">\u0423 \u043d\u0430\u0441\u0442\u0443\u043f\u043d\u043e\u043c\u0443 \u043f\u0440\u0438\u043a\u043b\u0430\u0434\u0456 \u043f\u043e\u043a\u0430\u0437\u0430\u043d\u043e, \u044f\u043a \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e \u0432 R.<\/span><\/p>\n<h3> <span style=\"color: #000000;\"><strong>\u041f\u0440\u0438\u043a\u043b\u0430\u0434: \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0430 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044f \u0432 R<\/strong><\/span><\/h3>\n<p> <span style=\"color: #000000;\">\u041f\u0440\u0438\u043f\u0443\u0441\u0442\u0456\u043c\u043e, \u043c\u0438 \u0441\u0442\u0432\u043e\u0440\u044e\u0454\u043c\u043e \u043d\u0430\u0441\u0442\u0443\u043f\u043d\u0438\u0439 \u043a\u0430\u0434\u0440 \u0434\u0430\u043d\u0438\u0445 \u0443 R, \u044f\u043a\u0438\u0439 \u043c\u0456\u0441\u0442\u0438\u0442\u044c \u0434\u0432\u0430 \u0441\u0442\u043e\u0432\u043f\u0446\u0456:<\/span><\/p>\n<pre style=\"background-color: #ececec; font-size: 15px;\"> <strong><span style=\"color: #008080;\">#make this example reproducible\n<\/span>set. <span style=\"color: #3366ff;\">seeds<\/span> (0)\n\n<span style=\"color: #008080;\">#create data frame with two columns\n<\/span>df &lt;- data. <span style=\"color: #3366ff;\">frame<\/span> (x=rnorm(1000),\n                 y=rnorm(1000))\n\n<span style=\"color: #008080;\">#view first six rows of data frame\n<\/span>head(df)\n\n           xy\n1 1.2629543 -0.28685156\n2 -0.3262334 1.84110689\n3 1.3297993 -0.15676431\n4 1.2724293 -1.38980264\n5 0.4146414 -1.47310399\n6 -1.5399500 -0.06951893<\/strong><\/pre>\n<p> <span style=\"color: #000000;\">\u041c\u0438 \u043c\u043e\u0436\u0435\u043c\u043e \u0432\u0438\u043a\u043e\u0440\u0438\u0441\u0442\u043e\u0432\u0443\u0432\u0430\u0442\u0438 \u0444\u0443\u043d\u043a\u0446\u0456\u0457 <a href=\"https:\/\/statorials.org\/uk\/\u043f\u043e\u0441\u0456\u0431\u043d\u0438\u043a-\u0456\u0437-\u0437\u0430\u0441\u0442\u043e\u0441\u0443\u0432\u0430\u043d\u043d\u044f-lapply-sapply-\u0456-tapply-\u0432-r\/\" target=\"_blank\" rel=\"noopener\">sapply()<\/a> \u0456 <a href=\"https:\/\/statorials.org\/uk\/\u0444\u0443\u043d\u043a\u0446\u0456\u044f-\u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044f-\u0432-r\/\" target=\"_blank\" rel=\"noopener\">quantile()<\/a> , \u0449\u043e\u0431 \u043e\u0431\u0447\u0438\u0441\u043b\u0438\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u0456 \u0434\u043b\u044f x \u0456 y:<\/span><\/p>\n<pre style=\"background-color: #ececec; font-size: 15px;\"> <strong><span style=\"color: #008080;\">#calculate quantiles for x and y\n<\/span>sapply(df, function(x) quantile(x, probs = seq(0, 1, 1\/4)))\n\n               xy\n0% -3.23638573 -3.04536393\n25% -0.70845589 -0.73331907\n50% -0.05887078 -0.03181533\n75% 0.68763873 0.71755969\n100% 3.26641452 3.03903341\n<\/strong><\/pre>\n<p> <span style=\"color: #000000;\">\u0417\u0432\u0435\u0440\u043d\u0456\u0442\u044c \u0443\u0432\u0430\u0433\u0443, \u0449\u043e x \u0456 y \u043c\u0430\u044e\u0442\u044c \u0441\u0445\u043e\u0436\u0456 \u0437\u043d\u0430\u0447\u0435\u043d\u043d\u044f \u0434\u043b\u044f \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u0456\u0432, \u0430\u043b\u0435 \u043d\u0435 \u0456\u0434\u0435\u043d\u0442\u0438\u0447\u043d\u0456 \u0437\u043d\u0430\u0447\u0435\u043d\u043d\u044f.<\/span><\/p>\n<p> <span style=\"color: #000000;\">\u041d\u0430\u043f\u0440\u0438\u043a\u043b\u0430\u0434, \u0437\u043d\u0430\u0447\u0435\u043d\u043d\u044f 25-\u0433\u043e \u043f\u0440\u043e\u0446\u0435\u043d\u0442\u0438\u043b\u044f \u0434\u043b\u044f x \u0441\u0442\u0430\u043d\u043e\u0432\u0438\u0442\u044c <strong>-0,708<\/strong> , \u0430 \u0437\u043d\u0430\u0447\u0435\u043d\u043d\u044f 25-\u0433\u043e \u043f\u0440\u043e\u0446\u0435\u043d\u0442\u0438\u043b\u044f \u0434\u043b\u044f y \u0441\u0442\u0430\u043d\u043e\u0432\u0438\u0442\u044c <strong>-0,7333<\/strong> .<\/span><\/p>\n<p> <span style=\"color: #000000;\">\u0429\u043e\u0431 \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e, \u043c\u0438 \u043c\u043e\u0436\u0435\u043c\u043e \u0432\u0438\u043a\u043e\u0440\u0438\u0441\u0442\u0430\u0442\u0438 \u0444\u0443\u043d\u043a\u0446\u0456\u044e <strong>normalize.quantiles()<\/strong> \u0437 \u043f\u0430\u043a\u0435\u0442\u0430 <a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/preprocessCore.html\" target=\"_blank\" rel=\"noopener\">preprocessCore<\/a> \u0432 R:<\/span><\/p>\n<pre style=\"background-color: #ececec; font-size: 15px;\"> <strong><span style=\"color: #008000;\">library<\/span> (preprocessCore)\n\n<span style=\"color: #008080;\">#perform quantile normalization\n<\/span>df_norm &lt;- as. <span style=\"color: #3366ff;\">data<\/span> . <span style=\"color: #3366ff;\">frame<\/span> ( <span style=\"color: #3366ff;\">normalize.quantiles<\/span> ( <span style=\"color: #3366ff;\">as.matrix<\/span> (df)))\n\n<span style=\"color: #008080;\">#rename data frame columns\n<\/span>names(df_norm) &lt;- c(' <span style=\"color: #ff0000;\">x<\/span> ', ' <span style=\"color: #ff0000;\">y<\/span> ')\n\n<span style=\"color: #008080;\">#view first six row of new data frame\n<\/span>head(df_norm)\n\n           xy\n1 1.2632137 -0.28520228\n2 -0.3469744 1.82440519\n3 1.3465807 -0.16471644\n4 1.2692599 -1.34472394\n5 0.4161133 -1.43717759\n6 -1.6269731 -0.07906793\n<\/strong><\/pre>\n<p> <span style=\"color: #000000;\">\u041f\u043e\u0442\u0456\u043c \u043c\u0438 \u043c\u043e\u0436\u0435\u043c\u043e \u0432\u0438\u043a\u043e\u0440\u0438\u0441\u0442\u0430\u0442\u0438 \u0442\u0430\u043a\u0438\u0439 \u043a\u043e\u0434, \u0449\u043e\u0431 \u0437\u043d\u043e\u0432\u0443 \u043e\u0431\u0447\u0438\u0441\u043b\u0438\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u0456 \u0434\u043b\u044f x \u0456 y:<\/span><\/p>\n<pre style=\"background-color: #ececec; font-size: 15px;\"> <strong><span style=\"color: #008080;\">#calculate quantiles for x and y\n<\/span>sapply(df_norm, function(x) quantile(x, probs = seq(0, 1, 1\/4)))\n\n               xy\n0% -3.14087483 -3.14087483\n25% -0.72088748 -0.72088748\n50% -0.04534305 -0.04534305\n75% 0.70259921 0.70259921\n100% 3.15272396 3.15272396\n<\/strong><\/pre>\n<p> <span style=\"color: #000000;\">\u0417\u0430\u0443\u0432\u0430\u0436\u0442\u0435, \u0449\u043e \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u0456 \u0442\u0435\u043f\u0435\u0440 \u043e\u0434\u043d\u0430\u043a\u043e\u0432\u0456 \u0434\u043b\u044f x \u0456 y.<\/span><\/p>\n<p> <span style=\"color: #000000;\">\u041c\u0438 \u0431 \u0441\u043a\u0430\u0437\u0430\u043b\u0438, \u0449\u043e x \u0456 y \u0431\u0443\u043b\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u043e \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u043e\u0432\u0430\u043d\u0456. \u0406\u043d\u0448\u0438\u043c\u0438 \u0441\u043b\u043e\u0432\u0430\u043c\u0438, \u0434\u0432\u0430 \u0440\u043e\u0437\u043f\u043e\u0434\u0456\u043b\u0438 \u0442\u0435\u043f\u0435\u0440 \u0456\u0434\u0435\u043d\u0442\u0438\u0447\u043d\u0456 \u0437 \u0442\u043e\u0447\u043a\u0438 \u0437\u043e\u0440\u0443 \u0441\u0442\u0430\u0442\u0438\u0441\u0442\u0438\u0447\u043d\u0438\u0445 \u0432\u043b\u0430\u0441\u0442\u0438\u0432\u043e\u0441\u0442\u0435\u0439.<\/span><\/p>\n<h3> <span style=\"color: #000000;\"><strong>\u0414\u043e\u0434\u0430\u0442\u043a\u043e\u0432\u0456 \u0440\u0435\u0441\u0443\u0440\u0441\u0438<\/strong><\/span><\/h3>\n<p> <span style=\"color: #000000;\">\u0423 \u043d\u0430\u0441\u0442\u0443\u043f\u043d\u0438\u0445 \u043f\u043e\u0441\u0456\u0431\u043d\u0438\u043a\u0430\u0445 \u043f\u043e\u044f\u0441\u043d\u044e\u0454\u0442\u044c\u0441\u044f, \u044f\u043a \u0432\u0438\u043a\u043e\u043d\u0443\u0432\u0430\u0442\u0438 \u0456\u043d\u0448\u0456 \u0442\u0438\u043f\u043e\u0432\u0456 \u0437\u0430\u0432\u0434\u0430\u043d\u043d\u044f \u0432 R:<\/span><\/p>\n<p> <a href=\"https:\/\/statorials.org\/uk\/\u044f\u043a-\u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0443\u0432\u0430\u0442\u0438-\u0434\u0430\u043d\u0456-\u0432-r\/\" target=\"_blank\" rel=\"noopener\">\u042f\u043a \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0443\u0432\u0430\u0442\u0438 \u0434\u0430\u043d\u0456 \u0432 R<\/a><br \/> <a href=\"https:\/\/statorials.org\/uk\/\u043f\u0440\u043e\u0446\u0435\u043d\u0442\u0438\u043b\u0456-\u0432-r\/\" target=\"_blank\" rel=\"noopener\">\u042f\u043a \u043e\u0431\u0447\u0438\u0441\u043b\u0438\u0442\u0438 \u043f\u0440\u043e\u0446\u0435\u043d\u0442\u0438\u043b\u044c \u0443 R<\/a><br \/> <a href=\"https:\/\/statorials.org\/uk\/\u0444\u0443\u043d\u043a\u0446\u0456\u044f-\u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044f-\u0432-r\/\" target=\"_blank\" rel=\"noopener\">\u042f\u043a \u0432\u0438\u043a\u043e\u0440\u0438\u0441\u0442\u043e\u0432\u0443\u0432\u0430\u0442\u0438 \u0444\u0443\u043d\u043a\u0446\u0456\u044e quantile() \u0443 R<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>\u0423 \u0441\u0442\u0430\u0442\u0438\u0441\u0442\u0438\u0446\u0456 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0430 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044f \u2014 \u0446\u0435 \u043c\u0435\u0442\u043e\u0434, \u044f\u043a\u0438\u0439 \u0440\u043e\u0431\u0438\u0442\u044c \u0434\u0432\u0430 \u0440\u043e\u0437\u043f\u043e\u0434\u0456\u043b\u0438 \u0456\u0434\u0435\u043d\u0442\u0438\u0447\u043d\u0438\u043c\u0438 \u0437 \u0442\u043e\u0447\u043a\u0438 \u0437\u043e\u0440\u0443 \u0441\u0442\u0430\u0442\u0438\u0441\u0442\u0438\u0447\u043d\u0438\u0445 \u0432\u043b\u0430\u0441\u0442\u0438\u0432\u043e\u0441\u0442\u0435\u0439. \u0423 \u043d\u0430\u0441\u0442\u0443\u043f\u043d\u043e\u043c\u0443 \u043f\u0440\u0438\u043a\u043b\u0430\u0434\u0456 \u043f\u043e\u043a\u0430\u0437\u0430\u043d\u043e, \u044f\u043a \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e \u0432 R. \u041f\u0440\u0438\u043a\u043b\u0430\u0434: \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0430 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044f \u0432 R \u041f\u0440\u0438\u043f\u0443\u0441\u0442\u0456\u043c\u043e, \u043c\u0438 \u0441\u0442\u0432\u043e\u0440\u044e\u0454\u043c\u043e \u043d\u0430\u0441\u0442\u0443\u043f\u043d\u0438\u0439 \u043a\u0430\u0434\u0440 \u0434\u0430\u043d\u0438\u0445 \u0443 R, \u044f\u043a\u0438\u0439 \u043c\u0456\u0441\u0442\u0438\u0442\u044c \u0434\u0432\u0430 \u0441\u0442\u043e\u0432\u043f\u0446\u0456: #make this example reproducible set. seeds (0) #create data frame with [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[3],"tags":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v21.5 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>\u042f\u043a \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e \u0432 R - Statorials<\/title>\n<meta name=\"description\" content=\"\u0426\u0435\u0439 \u043f\u0456\u0434\u0440\u0443\u0447\u043d\u0438\u043a \u043f\u043e\u044f\u0441\u043d\u044e\u0454, \u044f\u043a \u0432\u0438\u043a\u043e\u043d\u0430\u0442\u0438 \u043a\u0432\u0430\u043d\u0442\u0438\u043b\u044c\u043d\u0443 \u043d\u043e\u0440\u043c\u0430\u043b\u0456\u0437\u0430\u0446\u0456\u044e \u0432 R, \u0456\u0437 \u043f\u043e\u0432\u043d\u0438\u043c 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